WormBase Tree Display for Variation: WBVar00098341
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| WBVar00098341 | Name | Public_name | WBVar00098341 | ||
|---|---|---|---|---|---|
| Other_name | pas3200 | ||||
| haw125235 | |||||
| cewivar00080815 | |||||
| CE41426:p.Gly49= | |||||
| K05F6.10.1:c.147A>T | |||||
| HGVSg | CHROMOSOME_II:g.1575914T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T07H3 | |
| Flanking_sequences | tctcacgttaacatatctctcttgcctgaactcatccatgccgttagaaatcggcggagctaccacagaaccagtgatgttcactcgaacttcaaccttcaagcatccatcagccaaaaaatccacaacagatccccatttgaaaatgtcttttccttggctacagtaccccgctgacggctcgaacactgcgtcattcagtcttgcagtcatccgattgtcactgcccgagctgataatcatgtcgagatctgcttgaagcttgcgactctcctgaccagatcttcgtctcgagcacat | ccgactttgaaatcgtcattgcaacgtgtgatttgaattctcctaaaaacattgtttcagattactttagactgactacggactaaagtagactcaccaccaacagttcaaataattttccttctcactgtgcagtttgtcattgggcttcatacgatcaacattttcaaaaatgtgctccattttgaattctccacccatgattaaagcttcaaaagaggcaaagttggcgtttgcgattaaaaaaaaaaaaaccaagaaaaaagcttgagcaatcaaaagtcgacaatttcttatttt | |||
| Mapping_target | T07H3 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (69) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01295266 | |||
| WBVar00545100 | |||||
| WBVar01436066 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019421 | |||
| Transcript | K05F6.10.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | K05F6.10.1:c.147A>T | ||||
| HGVSp | CE41426:p.Gly49= | ||||
| cDNA_position | 162 | ||||
| CDS_position | 147 | ||||
| Protein_position | 49 | ||||
| Exon_number | 3/7 | ||||
| Codon_change | ggA/ggT | ||||
| Amino_acid_change | G | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
