WormBase Tree Display for Variation: WBVar00097979
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WBVar00097979 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00097979 | |||
Other_name | pas2838 | ||||
cewivar00078734 | |||||
CE51215:p.Leu14= | |||||
T13B5.9.1:c.42G>A | |||||
HGVSg | CHROMOSOME_II:g.1104443C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T13B5 | |
Flanking_sequences | ccgcacaggcgaaaatttaaaactgccataaccaggggaatatgggggtccaatccgcctaaaatttttatggagaatttgaaattgaaaatttgaaactgttttgttgagtcctcgcaaagttagaaaataatcgaccgcgacgcgaccgcgccgcaccccatcagaactcaaatctaacataatcaacggcaagatgggtgtcaattccggctcaaattttatggagaattcgaatttcacctgcatatccggcgataagctaccataaccactgataattgcaattttcatggggtt | aagccaagagcacatgagaatagagtaaggagcaagaacatttttgccgatttttaaaatttcagaaagttttgctcttgtagtgtttcaggatgttatggcgtttgttagggcctgggaatcaaaatatttctgactaagaaaaaaaatcggaaatgactcatttttattgctgttctcccaaaatgggagaaatgaccaagtttgagcctaggcccaagcctgaatatatgtctaggactgagtctgagcctaaacctagacttaagtcaaagtccaagcctaagcctgagcgtaagc | |||
Mapping_target | T13B5 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (47) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01435768 | |||
Status | Live | ||||
Affects | Gene | WBGene00020476 | |||
Transcript | T13B5.9.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T13B5.9.1:c.42G>A | ||||
HGVSp | CE51215:p.Leu14= | ||||
cDNA_position | 67 | ||||
CDS_position | 42 | ||||
Protein_position | 14 | ||||
Exon_number | 2/10 | ||||
Codon_change | ttG/ttA | ||||
Amino_acid_change | L | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |