WormBase Tree Display for Variation: WBVar00096997
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| WBVar00096997 | Name | Public_name | WBVar00096997 | ||
|---|---|---|---|---|---|
| Other_name | pas1856 | ||||
| haw114665 | |||||
| cewivar00071181 | |||||
| CE49642:p.Leu385= | |||||
| F12B6.3b.1:c.1153T>C | |||||
| CE49615:p.Leu411= | |||||
| F12B6.3a.1:c.1231T>C | |||||
| HGVSg | CHROMOSOME_I:g.2246527T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F12B6 | |
| Flanking_sequences | gcctccctcctcgaactcgccttcgtcgcctatcaggacaaaaagctcatcttaaaatccggaaaatcaaatgcagcaatcagcactttggtcagctatctgaaacactttgagccataccatgacgtgtcgtctccgccaccaccggctccgcttgatgagaaaaaatcgatgagccgaacgacatcgactggtacgaatcgatcgagaagtgaacttgatggtttggatacgaaggatttggaggaggaaattgcggagtatcggaagttggcgtatgccaggaagaaatggagattg | tggattttggagcaaatgttgataggatctcgtttattgtttttccgttggtaagttggaagagtaatgtagggttactgtagggtagctgaggggttactgtagaaatgctgtcggaatactgtatggttactgtagggttactgtagggctgctgtaaggttaatgtaggaatactgtaggattgctgtatggttactgtagggttactgtaggaatactgcatggttactgtagaaataatgtagggttactttaagattactgtaaggctactgtaggagtactgtgtggctactg | |||
| Mapping_target | F12B6 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (36) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00534530 | |||
| WBVar01279188 | |||||
| WBVar01330283 | |||||
| WBVar01419500 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00017399 | |||
| Transcript | F12B6.3b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F12B6.3b.1:c.1153T>C | ||||
| HGVSp | CE49642:p.Leu385= | ||||
| cDNA_position | 1153 | ||||
| CDS_position | 1153 | ||||
| Protein_position | 385 | ||||
| Exon_number | 6/7 | ||||
| Codon_change | Ttg/Ctg | ||||
| Amino_acid_change | L | ||||
| F12B6.3a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F12B6.3a.1:c.1231T>C | ||||
| HGVSp | CE49615:p.Leu411= | ||||
| cDNA_position | 1231 | ||||
| CDS_position | 1231 | ||||
| Protein_position | 411 | ||||
| Exon_number | 7/8 | ||||
| Codon_change | Ttg/Ctg | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
