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WormBase Tree Display for Variation: WBVar00095749

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Name Class

WBVar00095749EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00095749
Other_namepas608
cewivar00076440
T27A1.3b.1:c.1001+2572C>T
HGVSgCHROMOSOME_II:g.541077C>T
Sequence_detailsSMapS_parentSequenceY64C7A
Flanking_sequencesatcctacagtactcctacagtatcgctacaatactattacatcacctcgactatatccccccactgaccctaacgataaatttctatgtttttttaaaagaaaaatagaaagagccaattttcaggtttttcagaataaacggaaaaaggaacattttcgattgttcatttttttgtggtttgaccgccaaaattttgctttagcacgttgatgtgccactacggtttgatctacaaaatatgcgggatttttttttaccaaaaaagaaagcgaaaccagatgagaattctgcacagacgtactccaatttaaaaaaattacgattttagtttcacaattttttaaaaactaattttcccagtttgataatccgaaaatcccttcctataaatatttcaccgcgcgttgtattttgtgttatgctcacgtagtcacctccattgaatgataagatgatagtgatttggtatgataaccggaaagtacttagcgcctttttgtgagtgtccccccggtgggcatgttaattggttttaccgaaattccctattgtagcctcgtgaaacatcaaagaatgaaacttgaacaggtttcctgat
Mapping_targetY64C7A
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (36)
LaboratoryQX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01435435
StatusLive
AffectsGeneWBGene00020835
TranscriptT27A1.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT27A1.3b.1:c.1001+2572C>T
Intron_number5/5
ReferenceWBPaper00040707
MethodWGS_Pasadena_Quinlan