WormBase Tree Display for Variation: WBVar00094344

WBVar00094344 Evidence: Paper_evidence: WBPaper00040857
  Name: Public_name: ok3308
    Other_name: R06C1.3a.1:c.362_741+176del
    HGVSg: CHROMOSOME_I:g.11928542_11929097del
  Sequence_details: SMap: S_parent: Sequence: R06C1
    Flanking_sequences: ttggcctgctcggggagcacaagagctgtg ctgtaggtaaagtgcttctatccagaatat
    Mapping_target: R06C1
    Type_of_mutation: Deletion
    PCR_product: ok3308_external
      ok3308_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037507
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00305553
      WBGene00006958
    Transcript: R06C1.15
      R06C1.3a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: R06C1.3a.1:c.362_741+176del
        cDNA_position: 371-?
        CDS_position: 362-?
        Protein_position: 121-?
        Intron_number: 3/6
        Exon_number: 3/7
  Isolation: Mutagen: EMS
  Description: Phenotype_not_observed: WBPhenotype:0000436 Paper_evidence: WBPaper00040857
        Curator_confirmed: WBPerson712
        Remark: Mutants showed normal localization of SNB-1::VENUS in the RIA neuron. Paper_evidence: WBPaper00040857
            Curator_confirmed: WBPerson712
  Reference: WBPaper00040857
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele