WormBase Tree Display for Variation: WBVar00093739
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WBVar00093739 | Name | Public_name | ok2624 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_IV:g.7868875_7869556del | ||||
Sequence_details | SMap | S_parent | Sequence | T06C10 | |
Flanking_sequences | cccatctcactaattatacgcctaaatctt | acattcgattcggaaaacgaagagtcgatc | |||
Mapping_target | T06C10 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok2624_external | ||||
ok2624_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00032673 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00001453 | |||
Transcript | T06C10.4.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
cDNA_position | ?-156 | ||||
CDS_position | ?-133 | ||||
Protein_position | ?-45 | ||||
Intron_number | 2/3 | ||||
Exon_number | 1-3/4 | ||||
Isolation | Mutagen | EMS | |||
Description | Phenotype (17) | ||||
Reference | WBPaper00043908 | ||||
WBPaper00053388 | |||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |