WormBase Tree Display for Variation: WBVar00093588

WBVar00093588 Name: Public_name: ok2440
    Other_name: F09G2.1b.1:c.631-239_1580delinsTTAT
      F09G2.1a.1:c.757-239_1706delinsTTAT
      F09G2.1c.1:c.460-239_1409delinsTTAT
    HGVSg: CHROMOSOME_V:g.7202261_7203700delinsTTAT
  Sequence_details: SMap: S_parent: Sequence: F09G2
    Flanking_sequences: tcagcaatctgccgatttatctgaaaaaat caaaatagtaggtgtcccacctgcaatcga
    Mapping_target: F09G2
    Type_of_mutation: Insertion: TTAT
      Deletion
    PCR_product: OK2440_external
      OK2440_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032575
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00017310
    Transcript: F09G2.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F09G2.1a.1:c.757-239_1706delinsTTAT
        cDNA_position: ?-1731
        CDS_position: ?-1706
        Protein_position: ?-569
        Intron_number: 6-9/12
        Exon_number: 7-10/13
      F09G2.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F09G2.1c.1:c.460-239_1409delinsTTAT
        cDNA_position: ?-1784
        CDS_position: ?-1409
        Protein_position: ?-470
        Intron_number: 5-8/11
        Exon_number: 6-9/12
      F09G2.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F09G2.1b.1:c.631-239_1580delinsTTAT
        cDNA_position: ?-1580
        CDS_position: ?-1580
        Protein_position: ?-527
        Intron_number: 4-7/9
        Exon_number: 5-8/10
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele