WormBase Tree Display for Variation: WBVar00093406

WBVar00093406 Name: Public_name: ok2242
    HGVSg: CHROMOSOME_II:g.13460556_13462227delinsTCTCCGTATCAC
  Sequence_details: SMap: S_parent: Sequence: E01G4
    Flanking_sequences: aattccgaaaaaatcccgaataccctgcgg caaagatctccgtatcactgacaaaaagat
    Mapping_target: E01G4
    Type_of_mutation: Insertion: TCTCCGTATCAC
      Deletion
    PCR_product: ok2242_external
      ok2242_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032443
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00219226
      WBGene00008446
      WBGene00004116
    Transcript: E01G4.3b.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 1/1
        Exon_number: 1-2/2
      E01G4.3a.1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Intron_number: 2-3/4
        Exon_number: 1-5/5
      E01G4.9
      E01G4.3c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-4/4
        Exon_number: 3-5/5
      E01G4.4a.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-87
        CDS_position: ?-87
        Protein_position: ?-29
        Exon_number: 1/9
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele