WormBase Tree Display for Variation: WBVar00093202

WBVar00093202 Name: Public_name: ok2009
    HGVSg: CHROMOSOME_III:g.11848527_11849546del
  Sequence_details: SMap: S_parent: Sequence: Y56A3A
    Flanking_sequences: aggccccacagaaaggaggccccaccacgg ctttaaacctatgtgcactaccagataaaa
    Mapping_target: Y56A3A
    Type_of_mutation: Deletion
    PCR_product: OK2009_external
      OK2009_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004714
      WBStrain00032327
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003234
      WBGene00013225
    Transcript: Y56A3A.3.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 3/4
        Exon_number: 4-5/5
      Y56A3A.2.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 2871-?
        Exon_number: 10/10
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele