WormBase Tree Display for Variation: WBVar00092856

WBVar00092856 Name: Public_name: ok1648
    Other_name: Y71G12B.11b.1:c.*286+468_*691delinsAA
      Y71G12B.11a.1:c.2981+468_3386delinsAA
      Y71G12B.11e.1:c.1886+468_2291delinsAA
      Y71G12B.11c.1:c.992+468_1397delinsAA
      Y71G12B.11d.1:c.-146+468_260delinsAA
    HGVSg: CHROMOSOME_I:g.1733838_1734851delinsAA
  Sequence_details: SMap: S_parent: Sequence: Y71G12B
    Flanking_sequences: atataccaggagcggcatacgatttgttcc caatgttgggtcaggagttgcccagctcat
    Mapping_target: Y71G12B
    Type_of_mutation: Insertion: AA
      Deletion
    PCR_product: ok1648_external
      ok1648_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032143
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00006771
    Transcript: Y71G12B.11c.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y71G12B.11c.1:c.992+468_1397delinsAA
        cDNA_position: ?-1465
        CDS_position: ?-1397
        Protein_position: ?-466
        Intron_number: 4/6
        Exon_number: 5/7
      Y71G12B.11e.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y71G12B.11e.1:c.1886+468_2291delinsAA
        cDNA_position: ?-2291
        CDS_position: ?-2291
        Protein_position: ?-764
        Intron_number: 4/6
        Exon_number: 5/7
      Y71G12B.11a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y71G12B.11a.1:c.2981+468_3386delinsAA
        cDNA_position: ?-3391
        CDS_position: ?-3386
        Protein_position: ?-1129
        Intron_number: 8/11
        Exon_number: 9/12
      Y71G12B.11d.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y71G12B.11d.1:c.-146+468_260delinsAA
        cDNA_position: ?-544
        CDS_position: ?-260
        Protein_position: ?-87
        Intron_number: 1/5
        Exon_number: 2-3/6
      Y71G12B.11b.1 VEP_consequence: splice_acceptor_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y71G12B.11b.1:c.*286+468_*691delinsAA
        cDNA_position: ?-3689
        Intron_number: 10/12
        Exon_number: 11/13
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele