WormBase Tree Display for Variation: WBVar00092818

WBVar00092818 Name: Public_name: ok1610
    Other_name: Y51F10.2b.1:c.327_535-412del
      Y51F10.2c.1:c.75_283-412del
      Y51F10.2a.1:c.612_820-412del
    HGVSg: CHROMOSOME_I:g.1981609_1982769del
  Sequence_details: SMap: S_parent: Sequence: Y51F10
    Flanking_sequences: caatttgcacaaagtgcaacgcgattttcg aattttgagtataaaatataattatcttgc
    Mapping_target: Y51F10
    Type_of_mutation: Deletion
    PCR_product: OK1610_external
      OK1610_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032111
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00021763
    Transcript: Y51F10.2a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y51F10.2a.1:c.612_820-412del
        cDNA_position: 634-?
        CDS_position: 612-?
        Protein_position: 204-?
        Intron_number: 5/6
        Exon_number: 5/7
      Y51F10.2c.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y51F10.2c.1:c.75_283-412del
        cDNA_position: 75-?
        CDS_position: 75-?
        Protein_position: 25-?
        Intron_number: 1/1
        Exon_number: 1/2
      Y51F10.2b.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y51F10.2b.1:c.327_535-412del
        cDNA_position: 327-?
        CDS_position: 327-?
        Protein_position: 109-?
        Intron_number: 2/2
        Exon_number: 2/3
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele