WormBase Tree Display for Variation: WBVar00092797
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WBVar00092797 | Name | Public_name | ok1588 | ||
---|---|---|---|---|---|
Other_name | F35H10.4.2:c.117+112_1912delinsT | ||||
F35H10.4.1:c.117+112_1912delinsT | |||||
F35H10.4.3:c.117+112_1912delinsT | |||||
HGVSg | CHROMOSOME_IV:g.8304223_8306197delinsT | ||||
Sequence_details | SMap | S_parent | Sequence | F35H10 | |
Flanking_sequences | tgagtttgcaacgttttccgcaatggttaa | gtaatgccggatttgtcgtagacggtggaa | |||
Mapping_target | F35H10 | ||||
Type_of_mutation | Insertion | T | |||
Deletion | |||||
PCR_product | ok1588_external | ||||
ok1588_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036365 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00006914 | |||
Transcript | F35H10.4.1 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | F35H10.4.1:c.117+112_1912delinsT | ||||
cDNA_position | ?-1939 | ||||
CDS_position | ?-1912 | ||||
Protein_position | ?-638 | ||||
Intron_number | 2/6 | ||||
Exon_number | 3/7 | ||||
F35H10.4.3 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
HGVSc | F35H10.4.3:c.117+112_1912delinsT | ||||
cDNA_position | ?-1935 | ||||
CDS_position | ?-1912 | ||||
Protein_position | ?-638 | ||||
Intron_number | 2/6 | ||||
Exon_number | 3/7 | ||||
F35H10.4.2 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
HGVSc | F35H10.4.2:c.117+112_1912delinsT | ||||
cDNA_position | ?-1939 | ||||
CDS_position | ?-1912 | ||||
Protein_position | ?-638 | ||||
Intron_number | 2/6 | ||||
Exon_number | 3/7 | ||||
Isolation | Mutagen | EMS | |||
Description | Phenotype | WBPhenotype:0000315 | Paper_evidence | WBPaper00046308 | |
Curator_confirmed | WBPerson10425 | ||||
Reference | WBPaper00046308 | ||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |