WormBase Tree Display for Variation: WBVar00092679

WBVar00092679 Evidence: Paper_evidence: WBPaper00035406
  Name: Public_name: ok1465
    Other_name: B0457.1a.1:c.297-143_1749-388delinsAT
      B0457.1b.1:c.373_1743-388delinsAT
    HGVSg: CHROMOSOME_II:g.8903464_8905672delinsAT
  Sequence_details: SMap: S_parent: Sequence: B0457
    Flanking_sequences: ttcgatgacgcgtgtccaatgatgagcaaa aaacaaaaaatttttggtcgaaatttggac
    Mapping_target: B0457
    Type_of_mutation: Insertion: AT
      Deletion
    PCR_product: ok1465_external
      ok1465_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036207
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00002251
    Transcript: B0457.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: B0457.1b.1:c.373_1743-388delinsAT
        cDNA_position: 411-?
        CDS_position: 373-?
        Protein_position: 125-?
        Intron_number: 4-6/9
        Exon_number: 4-6/10
      B0457.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-4/4
        Exon_number: 3-5/5
      B0457.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: B0457.1a.1:c.297-143_1749-388delinsAT
        Intron_number: 3-6/9
        Exon_number: 4-6/10
  Isolation: Mutagen: EMS
  Description: Phenotype (13)
    Phenotype_not_observed: WBPhenotype:0000414 Paper_evidence: WBPaper00035406
        Curator_confirmed: WBPerson2021
        Remark: No E<->MS cell fate transformations or atypical cell death events in the MS lineage. The ABala lineage fate is retained in spite of the change in division plane and close contact to MS Paper_evidence: WBPaper00035406
            Curator_confirmed: WBPerson2021
        Variation_effect: Null: Paper_evidence: WBPaper00035406
            Curator_confirmed: WBPerson2021
      WBPhenotype:0000644 Paper_evidence: WBPaper00035406
        Curator_confirmed: WBPerson2021
        Remark: The mutant larvae are not paralyzed Paper_evidence: WBPaper00035406
            Curator_confirmed: WBPerson2021
        Variation_effect: Null: Paper_evidence: WBPaper00035406
            Curator_confirmed: WBPerson2021
  Reference: WBPaper00035406
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele