WormBase Tree Display for Variation: WBVar00092619

WBVar00092619 Name: Public_name: ok1404
    Other_name: C07B5.4a.1:c.40-302_232+362del
      C07B5.4c.1:c.40-302_232+362del
      C07B5.4b.1:c.-240_97+362del
    HGVSg: CHROMOSOME_X:g.9531669_9533013del
  Sequence_details: SMap: S_parent: Sequence: C07B5
    Flanking_sequences: TTTCCCGCGCATTTTTTGTTTCTCGAAGTT TAAACTGCTCACACAAAAATTACCACTGGG
    Mapping_target: C07B5
    Type_of_mutation: Deletion
    PCR_product: OK1404_external
      OK1404_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036149
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00007409
    Transcript: C07B5.4d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1-2/10
        Exon_number: 1-2/11
      C07B5.4c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C07B5.4c.1:c.40-302_232+362del
        Intron_number: 1-3/7
        Exon_number: 2-3/8
      C07B5.4a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C07B5.4a.1:c.40-302_232+362del
        Intron_number: 2-4/13
        Exon_number: 3-4/14
      C07B5.4b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C07B5.4b.1:c.-240_97+362del
        cDNA_position: 41-?
        Intron_number: 1-4/12
        Exon_number: 1-4/13
  Isolation: Mutagen: EMS
    Reverse_genetics: PCR
  Method: KO_consortium_allele