WormBase Tree Display for Variation: WBVar00092370

WBVar00092370 Name: Public_name: ok1101
    Other_name: EEED8.5.1:c.268_1204+605del
    HGVSg: CHROMOSOME_II:g.5399990_5401582del
  Sequence_details: SMap: S_parent: Sequence: EEED8
    Flanking_sequences: aacaagaaaggtggtgattcaaaagaagat ttctcttgaaaatgactaaaaatgatgttt
    Mapping_target: EEED8
    Type_of_mutation: Deletion
    PCR_product: ok1101_external
      ok1101_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036014
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003393
    Transcript: EEED8.5.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: EEED8.5.1:c.268_1204+605del
        cDNA_position: 269-?
        CDS_position: 268-?
        Protein_position: 90-?
        Intron_number: 3-4/7
        Exon_number: 3-4/8
  Isolation: Mutagen: UV/TMP
  Description: Phenotype: WBPhenotype:0000315 Paper_evidence: WBPaper00046308
        Curator_confirmed: WBPerson10425
  Reference: WBPaper00046308
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele