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WormBase Tree Display for Variation: WBVar00091683

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Name Class

WBVar00091683NamePublic_nameok388
Other_nameF26D10.9a.1:c.180_*42delinsAAAAAAAA
HGVSgCHROMOSOME_IV:g.17269566_17272101delinsAAAAAAAA
Sequence_detailsSMapS_parentSequenceF26D10
Flanking_sequencesaaagtacagaaatgatccgttctggaagccaaacctaattccttgttcatcttcaaattt
Mapping_targetF26D10
Type_of_mutationInsertionAAAAAAAA
Deletion
PCR_productok388_external
ok388_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00035583
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00000224
TranscriptF26D10.9a.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,stop_lost,3_prime_UTR_variant,intron_variant
VEP_impactHIGH
HGVScF26D10.9a.1:c.180_*42delinsAAAAAAAA
cDNA_position181-1885
CDS_position180-?
Protein_position60-?
Intron_number3-10/11
Exon_number3-12/12
F26D10.9b.1VEP_consequencetranscript_ablation
VEP_impactHIGH
Intron_number1-2/2
Exon_number1-3/3
IsolationMutagenUV/TMP
GeneticsMapping_dataIn_multi_point4164
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele