WormBase Tree Display for Variation: WBVar00091683
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WBVar00091683 | Name | Public_name | ok388 | ||
---|---|---|---|---|---|
Other_name | F26D10.9a.1:c.180_*42delinsAAAAAAAA | ||||
HGVSg | CHROMOSOME_IV:g.17269566_17272101delinsAAAAAAAA | ||||
Sequence_details | SMap | S_parent | Sequence | F26D10 | |
Flanking_sequences | aaagtacagaaatgatccgttctggaagcc | aaacctaattccttgttcatcttcaaattt | |||
Mapping_target | F26D10 | ||||
Type_of_mutation | Insertion | AAAAAAAA | |||
Deletion | |||||
PCR_product | ok388_external | ||||
ok388_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00035583 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00000224 | |||
Transcript | F26D10.9a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,stop_lost,3_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | F26D10.9a.1:c.180_*42delinsAAAAAAAA | ||||
cDNA_position | 181-1885 | ||||
CDS_position | 180-? | ||||
Protein_position | 60-? | ||||
Intron_number | 3-10/11 | ||||
Exon_number | 3-12/12 | ||||
F26D10.9b.1 | VEP_consequence | transcript_ablation | |||
VEP_impact | HIGH | ||||
Intron_number | 1-2/2 | ||||
Exon_number | 1-3/3 | ||||
Isolation | Mutagen | UV/TMP | |||
Genetics | Mapping_data | In_multi_point | 4164 | ||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |