WormBase Tree Display for Variation: WBVar00090890
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WBVar00090890 | Evidence | Paper_evidence | WBPaper00031335 | ||
---|---|---|---|---|---|
Name | Public_name | n4640 | |||
Other_name (2) | |||||
HGVSg | CHROMOSOME_IV:g.3232567_3233351del | ||||
Sequence_details | SMap | S_parent | Sequence | Y67D8A | |
Flanking_sequences | CCGGCCAAATCTAGAACTGC | ACCTCTGATAATACGGAACGG | |||
Mapping_target | Y67D8A | ||||
Type_of_mutation | Deletion | ||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00007202 | ||||
WBStrain00007203 | |||||
WBStrain00007204 | |||||
WBStrain00007205 | |||||
WBStrain00007209 | |||||
WBStrain00027508 | |||||
WBStrain00027525 | |||||
WBStrain00027592 | |||||
WBStrain00027593 | |||||
Laboratory | MT | ||||
Status | Live | ||||
Affects | Gene | WBGene00196015 | |||
WBGene00022059 | |||||
WBGene00003286 | |||||
Transcript | Y67D8A.6 | VEP_consequence | transcript_ablation | ||
VEP_impact | HIGH | ||||
Exon_number | 1/1 | ||||
Y67D8A.4 | |||||
Y67D8A.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67D8A.2b.1:c.1623+964_1623+1748del | ||||
Intron_number | 9/21 | ||||
Y67D8A.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y67D8A.2a.1:c.1623+964_1623+1748del | ||||
Intron_number | 9/20 | ||||
Interactor | WBInteraction000525170 | ||||
WBInteraction000534842 | |||||
WBInteraction000534843 | |||||
WBInteraction000534844 | |||||
WBInteraction000534845 | |||||
WBInteraction000534846 | |||||
WBInteraction000542495 | |||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00031335 | |
Genetics | Interpolated_map_position | IV | -5.44319 | ||
Description | Phenotype | WBPhenotype:0001171 | Paper_evidence | WBPaper00054795 | |
Curator_confirmed | WBPerson143 | ||||
Phenotype_not_observed (8) | |||||
Reference | WBPaper00031335 | ||||
WBPaper00035664 | |||||
WBPaper00054795 | |||||
Method | Deletion_allele |