WormBase Tree Display for Variation: WBVar00090522
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WBVar00090522 | Evidence | Paper_evidence | WBPaper00035548 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | n2616 | |||||
Other_name | R01E6.4b.1:c.320-1G>A | ||||||
R01E6.4a.1:c.593-1G>A | |||||||
HGVSg | CHROMOSOME_X:g.13534185G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | R01E6 | |||
Flanking_sequences | cttttcttataccttggattacttgttaca | aggaagtcgttacaatcacaaaagacgata | |||||
Mapping_target | R01E6 | ||||||
Type_of_mutation | Substitution | g | a | ||||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | MT | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00000051 | |||||
Transcript | R01E6.4a.1 | VEP_consequence | splice_acceptor_variant | ||||
VEP_impact | HIGH | ||||||
HGVSc | R01E6.4a.1:c.593-1G>A | ||||||
Intron_number | 6/13 | ||||||
R01E6.4b.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | R01E6.4b.1:c.320-1G>A | ||||||
Intron_number | 4/10 | ||||||
Genetics | Interpolated_map_position | X | 12.6978 | ||||
Description | Phenotype_not_observed | WBPhenotype:0000845 | Paper_evidence | WBPaper00035548 | |||
Curator_confirmed | WBPerson712 | ||||||
Remark | Animals are sensitive to levamisole. | Paper_evidence | WBPaper00035548 | ||||
Curator_confirmed | WBPerson712 | ||||||
WBPhenotype:0000886 | Paper_evidence | WBPaper00035548 | |||||
Curator_confirmed | WBPerson712 | ||||||
Remark | Animals are superficially wild-type. | Paper_evidence | WBPaper00035548 | ||||
Curator_confirmed | WBPerson712 | ||||||
Reference | WBPaper00035548 | ||||||
Method | Substitution_allele |