WormBase Tree Display for Variation: WBVar00090252

WBVar00090252 Evidence: Paper_evidence: WBPaper00003109
  Name: Public_name: n1777
    Other_name: CE31275:p.Pro482=
      CE49440:p.Pro473=
      AC7.2c.1:c.1665C>T
      CE49353:p.Pro555=
      CE25736:p.Pro483=
      AC7.2a.1:c.1449C>T
      AC7.2b.1:c.1446C>T
      AC7.2d.1:c.1419C>T
    HGVSg: CHROMOSOME_IV:g.5129037G>A
  Sequence_details: SMap: S_parent: Sequence: AC7
    Flanking_sequences: attgggagagaacaatttgacagcgattcc gaggaaattggtgagtttttggttcatatt
    Mapping_target: AC7
    Type_of_mutation: Substitution: C T Paper_evidence: WBPaper00003109
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00004929
    Transcript: AC7.2b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: AC7.2b.1:c.1446C>T
        HGVSp: CE31275:p.Pro482=
        cDNA_position: 1454
        CDS_position: 1446
        Protein_position: 482
        Exon_number: 9/11
        Codon_change: ccC/ccT
        Amino_acid_change: P
      AC7.2a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: AC7.2a.1:c.1449C>T
        HGVSp: CE25736:p.Pro483=
        cDNA_position: 1536
        CDS_position: 1449
        Protein_position: 483
        Exon_number: 8/10
        Codon_change: ccC/ccT
        Amino_acid_change: P
      AC7.2d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: AC7.2d.1:c.1419C>T
        HGVSp: CE49440:p.Pro473=
        cDNA_position: 1419
        CDS_position: 1419
        Protein_position: 473
        Exon_number: 8/9
        Codon_change: ccC/ccT
        Amino_acid_change: P
      AC7.2c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: AC7.2c.1:c.1665C>T
        HGVSp: CE49353:p.Pro555=
        cDNA_position: 1689
        CDS_position: 1665
        Protein_position: 555
        Exon_number: 9/11
        Codon_change: ccC/ccT
        Amino_acid_change: P
    Interactor: WBInteraction000500829
  Isolation: Mutagen: EMS Paper_evidence: WBPaper00003109
    Forward_genetics: Suppressor of clr-1(e1745ts)
  Genetics: Interpolated_map_position: IV 1.49278
  Description: Phenotype_not_observed: WBPhenotype:0000886 Person_evidence: WBPerson516
        Curator_confirmed: WBPerson712
        Remark: No phenotypes have been associated with any soc-2 allele as a single mutant. Person_evidence: WBPerson516
            Curator_confirmed: WBPerson712
  Reference: WBPaper00003109
  Method: Substitution_allele