WormBase Tree Display for Variation: WBVar00090148
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WBVar00090148 | Name | Public_name | n1377 | |||||
---|---|---|---|---|---|---|---|---|
Sequence_details | Type_of_mutation | Deletion | ||||||
SeqStatus | Pending_curation | |||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00027040 | |||||||
WBStrain00030729 | ||||||||
WBStrain00030730 | ||||||||
WBStrain00030732 | ||||||||
Laboratory | MT | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001185 | ||||||
Interactor (2) | ||||||||
Description | Phenotype | WBPhenotype:0000006 | Paper_evidence | WBPaper00006107 | ||||
Curator_confirmed | WBPerson712 | |||||||
Remark | SM chemoattraction can be rescued by expression of LET-756. | Paper_evidence | WBPaper00006107 | |||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0000245 | Paper_evidence | WBPaper00006107 | ||||||
WBPaper00002741 | ||||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | SM chemoattraction can be rescued by expression of LET-756. | Paper_evidence | WBPaper00006107 | |||||
Curator_confirmed | WBPerson712 | |||||||
Isolated in a screen for severely displaced SMs in a wild-type background. Displays a distribution of posteriorly displaced SMs similar in all egl-17 alleles. | Paper_evidence | WBPaper00002741 | ||||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0000640 | Paper_evidence | WBPaper00002741 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | egl-17(n1377) is 83% penetrant for the Egl phenotype. | Paper_evidence | WBPaper00002741 | |||||
Curator_confirmed | WBPerson712 | |||||||
Penetrance | Incomplete | 83% | Paper_evidence | WBPaper00002741 | ||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0001645 | Paper_evidence | WBPaper00006119 | ||||||
Curator_confirmed | WBPerson1754 | |||||||
Remark | n1377 and s2613 together, but not individually, block the protein degradation observed in clr-1(e1745) | Paper_evidence | WBPaper00006119 | |||||
Curator_confirmed | WBPerson1754 | |||||||
Phenotype_not_observed (2) | ||||||||
Reference | WBPaper00040284 | |||||||
WBPaper00006107 | ||||||||
WBPaper00002741 | ||||||||
WBPaper00006119 | ||||||||
WBPaper00010221 | ||||||||
WBPaper00044058 | ||||||||
Remark | This deletion removes 531bp towards the 5' end of egl-17. Exon 2 is completely removed along with nearly the whole of intron 2. The exact breakpoint are not published. | Paper_evidence | WBPaper00002741 | |||||
Method | Deletion_allele |