WormBase Tree Display for Variation: WBVar00089946
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| WBVar00089946 | Evidence | Paper_evidence | WBPaper00024411 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Public_name | n1081 | |||||||
| Other_name | CE05480:p.Ala367Val | ||||||||
| C50H2.2b.1:c.1100C>T | |||||||||
| CE36586:p.Ala401Val | |||||||||
| C50H2.2a.1:c.1202C>T | |||||||||
| HGVSg | CHROMOSOME_V:g.9906998C>T | ||||||||
| Sequence_details | SMap | S_parent | Sequence | C50H2 | |||||
| Flanking_sequences | acataacagttcatgttaaaatatgttggg | tgcttatcaagttgtcatggctattcttca | |||||||
| Mapping_target | C50H2 | ||||||||
| Type_of_mutation | Substitution | c | t | ||||||
| SeqStatus | Sequenced | ||||||||
| Variation_type | Allele | ||||||||
| Origin | Species | Caenorhabditis elegans | |||||||
| Strain | WBStrain00026953 | ||||||||
| Laboratory | MT | ||||||||
| Status | Live | ||||||||
| Affects | Gene | WBGene00001211 | |||||||
| Transcript | C50H2.2b.1 (11) | ||||||||
| C50H2.2a.1 (12) | |||||||||
| Interactor | WBInteraction000501227 | ||||||||
| WBInteraction000501228 | |||||||||
| WBInteraction000501229 | |||||||||
| WBInteraction000501230 | |||||||||
| WBInteraction000501231 | |||||||||
| Genetics | Interpolated_map_position | V | 2.20951 | ||||||
| Mapping_data | In_multi_point | 1672 | |||||||
| Description | Phenotype (26) | ||||||||
| Phenotype_not_observed | WBPhenotype:0000005 | Paper_evidence | WBPaper00035082 | ||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Remark | egl-47(dm) mutant, like the wild type, laid very few early-stage eggs | Paper_evidence | WBPaper00035082 | ||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Dominant | Paper_evidence | WBPaper00035082 | |||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| WBPhenotype:0000905 | Person_evidence | WBPerson261 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | HSN appear normal. | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| EQ_annotations | Anatomy_term | WBbt:0006830 | PATO:0000460 | Person_evidence | WBPerson261 | ||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0001068 | Paper_evidence | WBPaper00001133 | |||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Dominant | Paper_evidence | WBPaper00001133 | |||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Variation_effect | Hypermorph_gain_of_function | Paper_evidence | WBPaper00001133 | ||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| EQ_annotations | Life_stage | WBls:0000057 | PATO:0000460 | Paper_evidence | WBPaper00001133 | ||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Phenotype_assay | Treatment | 7.5 mg/ml serotonin | Paper_evidence | WBPaper00001133 | |||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Temperature | 24 | Paper_evidence | WBPaper00001133 | ||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| WBPhenotype:0001629 | Person_evidence | WBPerson261 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | stimulated by serotonin | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Reference | WBPaper00038249 | ||||||||
| WBPaper00043908 | |||||||||
| WBPaper00016216 | |||||||||
| WBPaper00001133 | |||||||||
| WBPaper00035082 | |||||||||
| Method | Substitution_allele |
