WormBase Tree Display for Variation: WBVar00089159
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WBVar00089159 | Evidence | Paper_evidence | WBPaper00004764 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | mn415 | |||||
Other_name | CE15742:p.Gln255Ter | ||||||
CC4.3.1:c.763C>T | |||||||
CC4.3.2:c.763C>T | |||||||
HGVSg | CHROMOSOME_I:g.12998079C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | CC4 | |||
Flanking_sequences | aatggaaaattgagaaaggatttgaaatat | aggtagattttttagaatttttgggtttttg | |||||
Mapping_target | CC4 | ||||||
Type_of_mutation | Substitution | c | t | ||||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00034393 | ||||||
WBStrain00034408 | |||||||
WBStrain00034414 | |||||||
Laboratory | SP | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00004895 | |||||
Transcript | CC4.3.2 | VEP_consequence | stop_gained,splice_region_variant | ||||
VEP_impact | HIGH | ||||||
HGVSc | CC4.3.2:c.763C>T | ||||||
HGVSp | CE15742:p.Gln255Ter | ||||||
cDNA_position | 849 | ||||||
CDS_position | 763 | ||||||
Protein_position | 255 | ||||||
Exon_number | 6/14 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
CC4.3.1 | VEP_consequence | stop_gained,splice_region_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | CC4.3.1:c.763C>T | ||||||
HGVSp | CE15742:p.Gln255Ter | ||||||
cDNA_position | 849 | ||||||
CDS_position | 763 | ||||||
Protein_position | 255 | ||||||
Exon_number | 6/13 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
Interactor | WBInteraction000518968 | ||||||
WBInteraction000518973 | |||||||
WBInteraction000518974 | |||||||
WBInteraction000518975 | |||||||
WBInteraction000518976 | |||||||
WBInteraction000518977 | |||||||
WBInteraction000518978 | |||||||
Genetics | Interpolated_map_position | I | 16.8336 | ||||
Mapping_data | In_multi_point | 2767 | |||||
2768 | |||||||
2769 | |||||||
2770 | |||||||
Description | Phenotype_not_observed | WBPhenotype:0000886 | Person_evidence | WBPerson261 | |||
Curator_confirmed | WBPerson712 | ||||||
Remark | Essentially WT phenotype alone. | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
Reference | WBPaper00014522 | ||||||
Method | Substitution_allele |