WormBase Tree Display for Variation: WBVar00088536

WBVar00088536 Evidence: Paper_evidence: WBPaper00004181
  Name: Public_name: m20
    Other_name (15)
    HGVSg: CHROMOSOME_X:g.10661711G>A
  Sequence_details: SMap: S_parent: Sequence: F11A1
    Flanking_sequences: atgcttcacagttggtatgaaaaaagagtg attttaaacgaagaacaactgcggcggagg
    Mapping_target: F11A1
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00004181
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006154
      WBStrain00006224
      WBStrain00006356
    Laboratory: DR
    Status: Live
  Affects: Gene: WBGene00000908
    Transcript: F11A1.3b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F11A1.3b.1:c.384G>A
        HGVSp: CE27585:p.Trp128Ter
        cDNA_position: 384
        CDS_position: 384
        Protein_position: 128
        Exon_number: 4/15
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      F11A1.3e.2 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F11A1.3e.2:c.384G>A
        HGVSp: CE54230:p.Trp128Ter
        cDNA_position: 812
        CDS_position: 384
        Protein_position: 128
        Exon_number: 6/19
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      F11A1.3e.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F11A1.3e.1:c.384G>A
        HGVSp: CE54230:p.Trp128Ter
        cDNA_position: 592
        CDS_position: 384
        Protein_position: 128
        Exon_number: 7/20
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      F11A1.3e.4 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F11A1.3e.4:c.384G>A
        HGVSp: CE54230:p.Trp128Ter
        cDNA_position: 545
        CDS_position: 384
        Protein_position: 128
        Exon_number: 6/19
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      F11A1.3f.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F11A1.3f.1:c.459G>A
        HGVSp: CE54221:p.Trp153Ter
        cDNA_position: 600
        CDS_position: 459
        Protein_position: 153
        Exon_number: 6/18
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      F11A1.3a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F11A1.3a.1:c.561G>A
        HGVSp: CE27584:p.Trp187Ter
        cDNA_position: 561
        CDS_position: 561
        Protein_position: 187
        Exon_number: 6/18
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      F11A1.3g.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F11A1.3g.1:c.561G>A
        HGVSp: CE54229:p.Trp187Ter
        cDNA_position: 592
        CDS_position: 561
        Protein_position: 187
        Exon_number: 7/19
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      F11A1.3e.3 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F11A1.3e.3:c.384G>A
        HGVSp: CE54230:p.Trp128Ter
        cDNA_position: 770
        CDS_position: 384
        Protein_position: 128
        Exon_number: 8/21
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      F11A1.3d.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F11A1.3d.1:c.459G>A
        HGVSp: CE39240:p.Trp153Ter
        cDNA_position: 459
        CDS_position: 459
        Protein_position: 153
        Exon_number: 5/16
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
    Interactor (59)
  Genetics: Interpolated_map_position: X 2.36893
    Mapping_data: In_2_point: 432
      In_multi_point (5)
  Description (2)
  Reference (19)
  Method: Substitution_allele