WormBase Tree Display for Variation: WBVar00088016
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| WBVar00088016 | Evidence | Paper_evidence | WBPaper00001109 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | it37 | |||||
| Other_name | F59E12.2.1:c.2053C>T | ||||||
| CE28571:p.Arg685Ter | |||||||
| HGVSg | CHROMOSOME_II:g.5654159C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F59E12 | |||
| Flanking_sequences | cctgatgatcaacgatttatgcgaactgat | gagtacctgacagagcttcagaaatgcttc | |||||
| Mapping_target | F59E12 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00035908 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | KK | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006988 | |||||
| Transcript | F59E12.2.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F59E12.2.1:c.2053C>T | ||||||
| HGVSp | CE28571:p.Arg685Ter | ||||||
| cDNA_position | 2079 | ||||||
| CDS_position | 2053 | ||||||
| Protein_position | 685 | ||||||
| Exon_number | 8/9 | ||||||
| Codon_change | Cga/Tga | ||||||
| Amino_acid_change | R/* | ||||||
| Genetics | Interpolated_map_position | II | -0.985728 | ||||
| Reference | WBPaper00001109 | ||||||
| Method | Substitution_allele |
