WormBase Tree Display for Variation: WBVar00085727
expand all nodes | collapse all nodes | view schema
WBVar00085727 | Name | Public_name | WBVar00085727 | ||
---|---|---|---|---|---|
Other_name | haw110087 | ||||
cewivar00062705 | |||||
C27C12.2.1:c.1029T>C | |||||
CE40601:p.Asn343= | |||||
HGVSg | CHROMOSOME_X:g.14847329T>C | ||||
Sequence_details | SMap | S_parent | Sequence | C27C12 | |
Flanking_sequences | tcaatgattcagataatgacttcaa | tcctttgagttttcatccacttctg | |||
Mapping_target | C27C12 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00007772 | |||
Transcript | C27C12.2.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C27C12.2.1:c.1029T>C | ||||
HGVSp | CE40601:p.Asn343= | ||||
cDNA_position | 1036 | ||||
CDS_position | 1029 | ||||
Protein_position | 343 | ||||
Exon_number | 7/11 | ||||
Codon_change | aaT/aaC | ||||
Amino_acid_change | N | ||||
Remark | [20081124 db] this Variation was previously named hw110087 | ||||
Method | WGS_Hawaiian_Waterston |