WormBase Tree Display for Variation: WBVar00084074

WBVar00084074 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar00084074
    Other_name: pas28641
      haw108434
      cewivar00115987
      F46G10.5b.1:c.2487+224A>G
      F46G10.5a.1:c.2289+224A>G
    HGVSg: CHROMOSOME_X:g.13347161A>G
  Sequence_details: SMap: S_parent: Sequence: F46G10
    Flanking_sequences: agccaatacgatttacaccccataa tatgtcttgaggttttctgaaaatt
    Mapping_target: F46G10
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (41)
    Laboratory: RW
      QX
    Person: WBPerson1562
      WBPerson6900
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
      WGS_Andersen
    History: Acquires_merge: WBVar00216865
        WBVar01472031
    Status: Live
  Affects: Gene: WBGene00004238
    Transcript: F46G10.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F46G10.5b.1:c.2487+224A>G
        Intron_number: 17/18
      F46G10.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F46G10.5a.1:c.2289+224A>G
        Intron_number: 15/16
  Reference: WBPaper00040707
  Remark: [20081124 db] this Variation was previously named hw108434
  Method: WGS_Hawaiian_Waterston