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WormBase Tree Display for Variation: WBVar00083042

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Name Class

WBVar00083042NamePublic_nameWBVar00083042
Other_namehaw107402
cewivar00275876
F13D2.1b.1:c.4541-102A>T
F13D2.1a.1:c.4475-102A>T
HGVSgCHROMOSOME_X:g.11164709T>A
Sequence_detailsSMapS_parentSequenceC05C9
Flanking_sequencestgaaagcccagaaactaatttttttaagtcttataatcgagttttataag
Mapping_targetC05C9
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00008735
TranscriptF13D2.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF13D2.1b.1:c.4541-102A>T
Intron_number35/38
F13D2.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF13D2.1a.1:c.4475-102A>T
Intron_number34/37
Remark[20081124 db] this Variation was previously named hw107402
MethodWGS_Hawaiian_Waterston