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WormBase Tree Display for Variation: WBVar00082175

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Name Class

WBVar00082175NamePublic_nameWBVar00082175
Other_name (11)
HGVSgCHROMOSOME_X:g.10107934T>C
Sequence_detailsSMapS_parentSequenceT06H11
Flanking_sequencesagcaaaaacctctcatatttttccgcatcagtcatttcattgtacttgag
Mapping_targetT06H11
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (38)
LaboratoryRW
PersonWBPerson1562
WBPerson6900
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar00099774
StatusLive
AffectsGeneWBGene00198156
WBGene00006792
TranscriptT06H11.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1f.1:c.562-141A>G
Intron_number5/14
T06H11.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1e.1:c.217-141A>G
Intron_number3/13
T06H11.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1d.1:c.442-141A>G
Intron_number2/11
T06H11.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1b.1:c.412-141A>G
Intron_number4/12
T06H11.12VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScT06H11.12:n.49T>C
cDNA_position49
Exon_number1/1
T06H11.1g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1g.1:c.286-141A>G
Intron_number3/12
T06H11.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1a.1:c.526-141A>G
Intron_number2/11
T06H11.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1c.1:c.298-141A>G
Intron_number3/13
Remark[20081124 db] this Variation was previously named hw106535
MethodWGS_Hawaiian_Waterston