WormBase Tree Display for Variation: WBVar00072049
expand all nodes | collapse all nodes | view schema
| WBVar00072049 | Name | Public_name | WBVar00072049 | ||
|---|---|---|---|---|---|
| Other_name | pas40576 | ||||
| haw96409 | |||||
| cewivar00054051 | |||||
| Y60A3A.1.1:c.156G>A | |||||
| CE24516:p.Leu52= | |||||
| HGVSg | CHROMOSOME_V:g.20003201C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y60A3A | |
| Flanking_sequences | ttagaattttaatctcttttgtcag | agattctttgatttgctgatattct | |||
| Mapping_target | Y60A3A | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (32) | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar00228800 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006786 | |||
| Transcript | Y60A3A.1.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y60A3A.1.1:c.156G>A | ||||
| HGVSp | CE24516:p.Leu52= | ||||
| cDNA_position | 221 | ||||
| CDS_position | 156 | ||||
| Protein_position | 52 | ||||
| Exon_number | 3/11 | ||||
| Codon_change | ctG/ctA | ||||
| Amino_acid_change | L | ||||
| Remark | [20081124 db] this Variation was previously named hw96409 | ||||
| Method | WGS_Hawaiian_Waterston |
