WormBase Tree Display for Variation: WBVar00069580
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WBVar00069580 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00069580 | |||
Other_name | pas25513 | ||||
cewivar00084137 | |||||
Y59C2A.2a.1:c.1301-29C>T | |||||
HGVSg | CHROMOSOME_II:g.2199904G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C33C12 | |
Flanking_sequences | tttcaacgatttcaagcaaatttcgaccgatttacccaccaaaatgaacatggagctcgtcagcagcgccagaccgccgtactgtcccgcaaatcgatactgatacgagtagaagaagaactgatagatgtagaagaaccgcagccagaatttcttcgacgtagccgagtgacagcatatcgcatcgtattgatcggcgacccatacgatgagaatcacgtagaatgcgatcgatgtatcgttgaaaacttcagccatgattgcctccatccctgaaacacctgtattccagatatatgg | ggctttttcatcattttccgaattttcaggggagttataactaggaaaattgaattctccgctattttcttagtctaatccttaattttcaggctaaaattcaaaaatcgcgtcaaatcgggtgtttgggggtattgtagtcggtgtttgcgtacttttgacgctaccgtaacccaggacatttcaaaattgagctagaaacctctagtttttggttttcaggctgaaatttcgcaggagtttcgaattttagatgaaaaatttcaaaattttcagcattttactcgaattttcgtcaat | |||
Mapping_target | C33C12 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (36) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01436317 | |||
Status | Live | ||||
Affects | Gene | WBGene00021985 | |||
Transcript | Y59C2A.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y59C2A.2a.1:c.1301-29C>T | ||||
Intron_number | 12/17 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |