WormBase Tree Display for Variation: WBVar00069500
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| WBVar00069500 | Name | Public_name | WBVar00069500 | ||
|---|---|---|---|---|---|
| Other_name | pas25497 | ||||
| haw126265 | |||||
| cewivar00084115 | |||||
| Y59C2A.2a.1:c.1831+27T>C | |||||
| Y59C2A.2b.1:c.196+27T>C | |||||
| HGVSg | CHROMOSOME_II:g.2193667A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C33C12 | |
| Flanking_sequences | aaactagaggtttatagctcaattttgaaatttccaggggtacggtagctccaaaagtacgcaaacaccaaatttcacgcgattttcgatttttgagctaaaaattcacggttagactaaataaacattgataaattcaaatttaactctaaaaattcagaaaaaaaaactttggaactcgaaaatccaacatttcagctaaattttcgaactttagcgaaaaattcgcaatttggccgaaaatttcagaattttttgctgcgatagctaaaatttcacggagaattcgaatttttcaca | aaacttcgcaaaaactcaaaacctaccaggttccacgacaagtgacggaccccgtgcgtcaaatacactggaggggctcagcggctcggcgatctgcaagaaaatgggggatttttgtcagaaaaattgacatttgtatttaaaaatggggttttttgggaaaattgaaaaaaaaaatttcgaaaaaaaaatttttttttcaagattttttcaaatttttttttttgaaaactttatttttctttaaaaaaaatctaatttcctcctaattttcactaaattttcactaaattttcagca | |||
| Mapping_target | C33C12 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (94) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01362838 | |||
| WBVar01297647 | |||||
| WBVar00546130 | |||||
| WBVar01436311 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021985 | |||
| Transcript | Y59C2A.2a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y59C2A.2a.1:c.1831+27T>C | ||||
| Intron_number | 16/17 | ||||
| Y59C2A.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y59C2A.2b.1:c.196+27T>C | ||||
| Intron_number | 3/4 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
