WormBase Tree Display for Variation: WBVar00068860
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| WBVar00068860 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00068860 | |||
| Other_name | pas25369 | ||||
| cewivar00083799 | |||||
| C40A11.3.1:c.619G>T | |||||
| CE45614:p.Ala207Ser | |||||
| HGVSg | CHROMOSOME_II:g.2142809G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C40A11 | |
| Flanking_sequences | aacaggtgttggtctttttgtaaagaacaagtttgtaattgatgattttttaccaaaaaatattattgcgtaagcagcatgccaattttcgattaaaaaaaacaaccttgcaagcgtaaaaatggagaagttcgctactccacctttaagacatgggctgtcgaattgcataaatctcatatgcaaatccgatgggcaccttctgacagatccatagtcagacagaaatttgagtatttcaattcagatccatatgaagaattcacagggtttgtagatgagtttcttgctgaaattgtt | ctgattctcgggataatgaagatgatagtgcgaatagtgagggtgatgctcacaatcaggacgcagcacttatataaatggagaacgtatgtatatattttactttcagtctctaatttctttgaataaacactatatatgctcattgtctgtctttaaacatggaagttttgtcactctagaaaaattaatggtgctgctggggtttaatggtggagttgacagaaaataactgttaagattagttttaaaaacattataattttcaaatgtttttttttaatgttgcaattaaagaat | |||
| Mapping_target | C40A11 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (45) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01436282 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00016546 | |||
| Transcript | C40A11.3.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | C40A11.3.1:c.619G>T | ||||
| HGVSp | CE45614:p.Ala207Ser | ||||
| cDNA_position | 632 | ||||
| CDS_position | 619 | ||||
| Protein_position | 207 | ||||
| Exon_number | 6/7 | ||||
| Codon_change | Gct/Tct | ||||
| Amino_acid_change | A/S | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
