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WormBase Tree Display for Variation: WBVar00067740

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Name Class

WBVar00067740NamePublic_nameWBVar00067740
Other_namepas25145
haw107426
cewivar00061799
C34F6.10d.1:c.464-230G>A
C34F6.10d.2:c.464-230G>A
C34F6.10c.1:c.482-230G>A
C34F6.10a.1:c.464-230G>A
C34F6.10b.1:c.482-230G>A
C34F6.10a.2:c.464-230G>A
HGVSgCHROMOSOME_X:g.11234850C>T
Sequence_detailsSMapS_parentSequenceC03A3
Flanking_sequencesttgaattggaagcggttggtttgtcatcccgggttcaccaatcatgcgaactgttccaggaccaagaagatcttaaattcattgttaaactatgtggactttttctgtgccatgtgttttggacttagttcacatatgaatatgataagtggatcttaaatctcgaacttatcgctggttgaatattaaatttaaatttaagtttaacttaataatacaattgtttaattttcaaattgttctaattaaaaaactgtaccaagaatgggcaacctaggtgccactgaaatcaatccaaacgtggtggaatcatttgttgtagtgaataactacgaggaacgccttgaaagtacgggttccaactgccacgttggaagccgttcattatgatgacgtcacactcaaccgagcccgcaccctctaggaaaacgcaaatttggaagatgaatagcaaacggaaaagaagaaaaagcagaacggatactgtggcaaaatcgcatatatttattttaagaaaaatgaaaattgaaatccaagcgtcctagtgacatatgtgagggtctctgccttgggttattggaatgacgtgccacactagct
Mapping_targetC03A3
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (38)
LaboratoryRW
PersonWBPerson6900
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00083066
StatusLive
AffectsGeneWBGene00007944
TranscriptC34F6.10a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F6.10a.2:c.464-230G>A
Intron_number3/16
C34F6.10d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F6.10d.1:c.464-230G>A
Intron_number4/16
C34F6.10c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F6.10c.1:c.482-230G>A
Intron_number3/15
C34F6.10b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F6.10b.1:c.482-230G>A
Intron_number3/16
C34F6.10d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F6.10d.2:c.464-230G>A
Intron_number3/15
C34F6.10a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F6.10a.1:c.464-230G>A
Intron_number4/17
MethodWGS_Pasadena_Quinlan