WormBase Tree Display for Variation: WBVar00067740
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WBVar00067740 | Name | Public_name | WBVar00067740 | ||
---|---|---|---|---|---|
Other_name | pas25145 | ||||
haw107426 | |||||
cewivar00061799 | |||||
C34F6.10d.1:c.464-230G>A | |||||
C34F6.10d.2:c.464-230G>A | |||||
C34F6.10c.1:c.482-230G>A | |||||
C34F6.10a.1:c.464-230G>A | |||||
C34F6.10b.1:c.482-230G>A | |||||
C34F6.10a.2:c.464-230G>A | |||||
HGVSg | CHROMOSOME_X:g.11234850C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C03A3 | |
Flanking_sequences | ttgaattggaagcggttggtttgtcatcccgggttcaccaatcatgcgaactgttccaggaccaagaagatcttaaattcattgttaaactatgtggactttttctgtgccatgtgttttggacttagttcacatatgaatatgataagtggatcttaaatctcgaacttatcgctggttgaatattaaatttaaatttaagtttaacttaataatacaattgtttaattttcaaattgttctaattaaaaaactgtaccaagaatgggcaacctaggtgccactgaaatcaatccaaac | gtggtggaatcatttgttgtagtgaataactacgaggaacgccttgaaagtacgggttccaactgccacgttggaagccgttcattatgatgacgtcacactcaaccgagcccgcaccctctaggaaaacgcaaatttggaagatgaatagcaaacggaaaagaagaaaaagcagaacggatactgtggcaaaatcgcatatatttattttaagaaaaatgaaaattgaaatccaagcgtcctagtgacatatgtgagggtctctgccttgggttattggaatgacgtgccacactagct | |||
Mapping_target | C03A3 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (38) | |||||
Laboratory | RW | ||||
Person | WBPerson6900 | ||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Hawaiian_Waterston | |||||
History | Acquires_merge | WBVar00083066 | |||
Status | Live | ||||
Affects | Gene | WBGene00007944 | |||
Transcript | C34F6.10a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C34F6.10a.2:c.464-230G>A | ||||
Intron_number | 3/16 | ||||
C34F6.10d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C34F6.10d.1:c.464-230G>A | ||||
Intron_number | 4/16 | ||||
C34F6.10c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C34F6.10c.1:c.482-230G>A | ||||
Intron_number | 3/15 | ||||
C34F6.10b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C34F6.10b.1:c.482-230G>A | ||||
Intron_number | 3/16 | ||||
C34F6.10d.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C34F6.10d.2:c.464-230G>A | ||||
Intron_number | 3/15 | ||||
C34F6.10a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C34F6.10a.1:c.464-230G>A | ||||
Intron_number | 4/17 | ||||
Method | WGS_Pasadena_Quinlan |