WormBase Tree Display for Variation: WBVar00067610
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| WBVar00067610 | Name | Public_name | WBVar00067610 | ||
|---|---|---|---|---|---|
| Other_name | pas25119 | ||||
| haw107404 | |||||
| cewivar00061768 | |||||
| F13D2.1b.1:c.3646-150T>C | |||||
| F13D2.1a.1:c.3580-150T>C | |||||
| HGVSg | CHROMOSOME_X:g.11166397A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C05C9 | |
| Flanking_sequences | caagtgttgttaacgggcttccatacgatccatcactactctgttgttcggatatccagtcagcaagtctgtcccaatctacttcagttccttctgcatatgcagtcactattgccgctagagcaaagctgttgaccataacttgacagctctgcaacgtactgagttcgaaatgtttcaactattttcaaaacttagctctctttttctgttttcagcagaacttaagaatataaaggttttgagtattacttgaatttatttttaaaatttctgtgaaaaaactaaatttaatatcta | acatacgttggattccatctataaaaaatgttcatcaaacaaattcattggcaacatatctagaaggcttttgagttttgttttcccccgaaaaagttcaactcttcattgtcaggccgcttgtttttatcatcgcgtattttatgccaatagtgaattatgtctgtggccaaaaaattaaataaaaaaaacttcatttttgaattcaaaatgaactcttctttttcagcaggatgtcctaactcgtcctttttaccagccctaaattaacctaacactactatttaattcttagttttt | |||
| Mapping_target | C05C9 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (39) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00083044 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00008735 | |||
| Transcript | F13D2.1b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F13D2.1b.1:c.3646-150T>C | ||||
| Intron_number | 29/38 | ||||
| F13D2.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F13D2.1a.1:c.3580-150T>C | ||||
| Intron_number | 28/37 | ||||
| Method | WGS_Pasadena_Quinlan |
