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WormBase Tree Display for Variation: WBVar00067090

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Name Class

WBVar00067090NamePublic_nameWBVar00067090
Other_namepas25015
haw45057
haw144613
cewivar00108670
ZK637.8f.1:c.154-38T>A
ZK637.8c.1:c.154-38T>A
ZK637.8e.1:c.154-38T>A
ZK637.8d.1:c.154-38T>A
ZK637.8b.1:c.154-38T>A
ZK637.8a.1:c.154-38T>A
HGVSgCHROMOSOME_III:g.8905824T>A
Sequence_detailsSMapS_parentSequenceZK637
Flanking_sequencesttcttaaatgttttctctcgaaagaagcgtttttgatttttttttccttcttatttttgaaatcttcatattatttcatggaaattcttacagaatcaactagaatgggtgattacgtgactcccggcgaggagccaccacaaccgggcatctatcgaagtgagcagatgtgcctggctcaactctaccttcaatctgatgcttcctatcaatgcgttgctgaactgggagagctcggacttgttcagtttcgtgatgtgagtttgtgatatgtaaaaaactattttcaattaataatttaaaaaaaagtaaaacttcaatttattttaattttcagcttaatcccgatgtgagctccttccaacgaaaatatgtaaatgaagtcagacggtgtgatgaaatggaacgaaaattgagatatcttgaacgagaaattaaaaaagatcagatcccgatgctggatactggtgagaatccagatgctccacttccacgagaaatgattgatttggaggtttgttgaaaaaaaaatataggtatataaatatgtgttgcaatttcacggtctattttttttgaatgtttaatttttaaaaagtt
Mapping_targetZK637
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (31)
LaboratoryAX
RW
PersonWBPerson6900
WBPerson4037
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00564478
WBVar01266746
WBVar01331765
WBVar00069678
StatusLive
AffectsGeneWBGene00006768
TranscriptZK637.8c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK637.8c.1:c.154-38T>A
Intron_number2/11
ZK637.8f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK637.8f.1:c.154-38T>A
Intron_number2/11
ZK637.8e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK637.8e.1:c.154-38T>A
Intron_number2/11
ZK637.8d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK637.8d.1:c.154-38T>A
Intron_number2/11
ZK637.8b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK637.8b.1:c.154-38T>A
Intron_number2/11
ZK637.8a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK637.8a.1:c.154-38T>A
Intron_number2/11
ReferenceWBPaper00038208
WBPaper00037807
MethodWGS_Pasadena_Quinlan