WormBase Tree Display for Variation: WBVar00066880
expand all nodes | collapse all nodes | view schema
WBVar00066880 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00066880 | |||
Other_name | pas24973 | ||||
cewivar00108595 | |||||
F44E2.4.1:c.1783-416C>A | |||||
HGVSg | CHROMOSOME_III:g.8835435G>T | ||||
Sequence_details | SMap | S_parent | Sequence | F44E2 | |
Flanking_sequences | aaccagaatcatcataatgattgataagcgaaataggttgttttttgattgaataattacttcaactataacaatgggaacaactagtacaacatgaaccggttcaagtttttacttgaattgagagtcagaataagatttagaatgttgtaaaaattggatcggttttaagatgttcagtatatgtagcaactggtatttaagaatctcactagaaaaacatgttaacttttttcagttctcaagctaaaaggtaataaacgtggagaaaataatccttgttaaaagaattcttatatg | gcaatgctaaaaaatttgggaaaattatttattttttacggtcatttttaattttttaatgttttataatgaaacgtcttagaagttcaaaccggcagcaattacttaaaaagtccaaaattttcaaaaaaaattggcaatttaccaaaattttgagtggaaaatctaaaaacttttgaggtgtttcattacgaaaattaaaaaaaaacggtaacttgccataactttgattgcacattttgaagaaaattaaacattacaaaacgttttatttgggttttcagtgtattttgacaaaat | |||
Mapping_target | F44E2 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (64) | |||||
Laboratory | AX | ||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01447276 | |||
WBVar01266677 | |||||
WBVar01331701 | |||||
Status | Live | ||||
Affects | Gene | WBGene00018418 | |||
Transcript | F44E2.4.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F44E2.4.1:c.1783-416C>A | ||||
Intron_number | 5/8 | ||||
Reference | WBPaper00037807 | ||||
Method | WGS_Pasadena_Quinlan |