WormBase Tree Display for Variation: WBVar00066615
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| WBVar00066615 | Name | Public_name | WBVar00066615 | ||
|---|---|---|---|---|---|
| Other_name | pas24920 | ||||
| cewivar00108504 | |||||
| K02D10.1b.1:c.68+1894A>T | |||||
| K02D10.3.1:c.268+87T>A | |||||
| HGVSg | CHROMOSOME_III:g.8771509A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | K02D10 | |
| Flanking_sequences | agctcgtttttttccatttcctcggccgtattggatttctttgatcgtttctttggaacacgcttatctctttttcctccttctttttttttcttttttttctttttgttgtttcttatgtttctttataagtttcgatttgggtttggtgtggttttgaacgtttttatgattcctgaaaataaaacctgtgaacttaattcctgaaattcctataaactcacttttgtttttttttaggcgcaaaatagcattccagcaaggacgagcaggaaagtgatatcgaggatcatcatccta | gaatgaacgtttttcatattttcacaccttatatatccaccaaatggaaagaggagggaattagattttttttttggaaaaccaacctgttggagcgacgattgctaccggctttggcttcttatcatttttaactgttggtttctttgcaacttttgctggcttttcacgaggcttcgagtagtctgatctaatctgaaaaatgttcattagtttatgtaaatttttgaattcccaccacatgcggaggctttttgacggaaggtgtgacggaaggtttgacggaaggtgacggaaggt | |||
| Mapping_target | K02D10 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019301 | |||
| WBGene00019303 | |||||
| Transcript | K02D10.1b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | K02D10.1b.1:c.68+1894A>T | ||||
| Intron_number | 2/5 | ||||
| K02D10.3.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K02D10.3.1:c.268+87T>A | ||||
| Intron_number | 3/3 | ||||
| Method | WGS_Pasadena_Quinlan |
