WormBase Tree Display for Variation: WBVar00065454
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| WBVar00065454 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00065454 | |||
| Other_name | pas24688 | ||||
| haw44770 | |||||
| cewivar00108121 | |||||
| F42H10.5a.2:c.-69+183A>T | |||||
| F42H10.5a.1:c.-69+1431A>T | |||||
| HGVSg | CHROMOSOME_III:g.8468522A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C30C11 | |
| Flanking_sequences | tctgtgtaccgcccttgtctcagccatctcctcctgctagaatggtttcatgaacattcgtatatttaaataaaacagtttaggtttcgaaatgaacagtgaagttgtggccgaacaagttgagatagcccacttctttttggcgtcttctggggtagattcatatcttttttatgcgtattttggtgggagggggccgagacagaattcaagatcctcctaaatatgtatggtttctgaaccgttgcatattacttttcaaatccattttgctcttattcaattattttcccaattttt | cacaacctgtaaataataccacgaagtcctttgagataaccaaacatcataattaaacactccaaaagttgtaagatttttgtaaattttatgccaaggccttggtaaatgtccaaattatctagtttcagatttttgagaaattcagagtattgttgcatttttgaatgacttctaggtttatcagtagcaaaaactttgcaatcgccattgattgactaaaatgaaaaaattttcaaaaaatgttatgatatttttctttcagtttaaataaacacttttctctttagtgctcctcta | |||
| Mapping_target | C30C11 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (108) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01447109 | |||
| WBVar01447110 | |||||
| WBVar00068243 | |||||
| WBVar01266243 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00018369 | |||
| Transcript | F42H10.5a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F42H10.5a.1:c.-69+1431A>T | ||||
| Intron_number | 1/7 | ||||
| F42H10.5a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F42H10.5a.2:c.-69+183A>T | ||||
| Intron_number | 1/7 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
