WormBase Tree Display for Variation: WBVar00065399
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| WBVar00065399 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00065399 | |||
| Other_name | pas24677 | ||||
| cewivar00108106 | |||||
| C30C11.2.1:c.*19T>A | |||||
| HGVSg | CHROMOSOME_III:g.8449028T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C30C11 | |
| Flanking_sequences | gatggagcaatcgatgctgttatcacttctgatgttcgtgatggacctcggtacatgcaaagttcagaaacagctgatatttatcgtacttcggagccacaagctcacttcgatactcgtatccgttactgcctcgaattgcacaatcaagctgtcaaagctctcagatatccaccaaagaagaagatcgctgttgaaactattgagcaagctcgtgaacgcgagcagcaagagttggaattcgccaaagagctggctgacgaagatgatgacgatttttaaaccgatcactcacttttt | aatttattctgaacaatgcattggaacgtgtctgtctccgtaaataattttgtgtgtattttatttgaattttctcgtctcttttcaaatcgagatccctgtccacttttttcccacacccgaatgaattttataaggatgaattgcatatttcaccaagtctttttaaaatatattttgtttaaaattggtatttttcaccgattttatttctgaattaagtagtgttaaaagagaaagatcgtctaaaaaataatcttcaattctatcgtgatagaaatccatgagttttcgaataaa | |||
| Mapping_target | C30C11 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (47) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01447107 | |||
| WBVar01266225 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004460 | |||
| Transcript | C30C11.2.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C30C11.2.1:c.*19T>A | ||||
| cDNA_position | 1538 | ||||
| Exon_number | 6/6 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
