WormBase Tree Display for Variation: WBVar00062304
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| WBVar00062304 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00062304 | |||
| Other_name | pas24058 | ||||
| cewivar00060774 | |||||
| CE03231:p.Ser46= | |||||
| F19C6.2.1:c.138G>A | |||||
| HGVSg | CHROMOSOME_X:g.10001156G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F19C6 | |
| Flanking_sequences | ttctctttctttatttttcgaaaataggtttttttttaaataatttttataatctgtgtaacaaaatcttacatttcagggtgatggctgaaaaaattctgttctacatatatcgtgattccggaacgtcgtccgaaaacttggttcgtgccattgtagacgagtttaaaaattttgtatttcgtgaccgggggattgcgtttacttcaaaaggtttgtcacccacaagctctcccttgaggaatttttttgacgcaaaaataaaagagttcatacatctttggcattgtcaggatactc | ggaattccactccttggggagctgcccattgactcgccattggacgacatttggaaggttgtcgccgtccttttcaaaatcagtgcccgggaggagggacttattttcaaagtgcataccacggactacgaaaagaacccgttggtcgcagaggctaaaaaaagcgacgtcttgccaaactgggcgcattctgttaaggacttcgcagaaaacgtgagttgttgctttgcttttaagatttatttgaaattacttttccaaaattgttgatatcagccaaaaataaattttataattttc | |||
| Mapping_target | F19C6 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (130) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01470679 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00008951 | |||
| Transcript | F19C6.2.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F19C6.2.1:c.138G>A | ||||
| HGVSp | CE03231:p.Ser46= | ||||
| cDNA_position | 142 | ||||
| CDS_position | 138 | ||||
| Protein_position | 46 | ||||
| Exon_number | 3/11 | ||||
| Codon_change | tcG/tcA | ||||
| Amino_acid_change | S | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
