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WormBase Tree Display for Variation: WBVar00062134

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Name Class

WBVar00062134NamePublic_nameWBVar00062134
Other_namepas24024
haw106539
cewivar00060841
T06H11.1b.1:c.263-6896A>T
T06H11.1d.1:c.292+6479A>T
T06H11.1c.1:c.148+1111A>T
T06H11.1f.1:c.413-6896A>T
HGVSgCHROMOSOME_X:g.10116227T>A
Sequence_detailsSMapS_parentSequenceT06H11
Flanking_sequencesatttgttgtcaaaaaaggtacatatcataggggtgaggtttttttttgatatcagaatcggtttgttctttttgattgctacagtaaatcaaaaagagaaacaatcaaataaatttaaattgtccacttatcaaaaataatgagatttagatttgctcagttctggtcaggtaagtgttagaaaaatattttttttaaactccaaaaaaagtaaaacgaaaatcgagcttttgcatttatctgttacgtattctcttttgctctgaatattgccctatttccattttttccattggcagctatagcttatagcttctatatgtacctcgttctttttcgtctttcgctcttatttccaagcgttccgcgttctccccacagcgttctgtgaccttcgaggtcatttgtttttttctctctcacgtctcccgaaacaaatctactactgggaatgattaacagacctttgccgtgatgtgtttttttagatccactaaaaaccttgtgcatttttgttttttttttttcggtgagcatccaaaaaaaaaagaaatggaggcgccgagcataaactaaaagtcatttatcaattgtgggagc
Mapping_targetT06H11
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (19)
LaboratoryRW
PersonWBPerson6900
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00082179
StatusLive
AffectsGeneWBGene00006792
TranscriptT06H11.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1b.1:c.263-6896A>T
Intron_number3/12
T06H11.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1f.1:c.413-6896A>T
Intron_number4/14
T06H11.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1d.1:c.292+6479A>T
Intron_number1/11
T06H11.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1c.1:c.148+1111A>T
Intron_number2/13
MethodWGS_Pasadena_Quinlan