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WormBase Tree Display for Variation: WBVar00062109

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Name Class

WBVar00062109NamePublic_nameWBVar00062109
Other_namepas24019
cewivar00060832
T06H11.1c.1:c.149-1206G>A
T06H11.1g.1:c.137-1206G>A
T06H11.1d.1:c.293-1206G>A
T06H11.1f.1:c.413-1206G>A
T06H11.1e.1:c.67+535G>A
T06H11.1b.1:c.263-1206G>A
HGVSgCHROMOSOME_X:g.10110537C>T
Sequence_detailsSMapS_parentSequenceT06H11
Flanking_sequencestttaactacttgatggtttatgaatataaaattgcagcttcagtgaataagtgagttattgtgattggaaagctttttttttgaaaagtttgataaaatttccttaaatatttcaaatttttaaaattgattctgaactatgtttttttattgtcttgaattgagaacgttgttttttattgaaaaaacagtaataattgtaatgatataaactattattccgtcataaatttttaaatggtatatacatagaaatgtacaaagaaaaatgatcaatatttaggtatatcgactcgttttatcacacaacaagcacataaggaaaaatgcaactaagtgacgctacaatctaacttttttgctttataaaaattcctatttagatgcgtaaaactaatataagtaaccagccgtggaccgcacctccggcgcggccccgacttctggggttgaaaactaatttttctgaaactaccgtaatcatacagcactcctaccgtaaccctattgtaccactacagtaccccgactatatccctacactaagcccaactcacattccctccagaagccaaaacttcatagactacaaagactaca
Mapping_targetT06H11
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (18)
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006792
TranscriptT06H11.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1b.1:c.263-1206G>A
Intron_number3/12
T06H11.1g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1g.1:c.137-1206G>A
Intron_number2/12
T06H11.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1f.1:c.413-1206G>A
Intron_number4/14
T06H11.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1e.1:c.67+535G>A
Intron_number2/13
T06H11.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1d.1:c.293-1206G>A
Intron_number1/11
T06H11.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT06H11.1c.1:c.149-1206G>A
Intron_number2/13
MethodWGS_Pasadena_Quinlan