WormBase Tree Display for Variation: WBVar00061999
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| WBVar00061999 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00061999 | |||
| Other_name | pas23997 | ||||
| cewivar00107920 | |||||
| CE00083:p.Pro188Ser | |||||
| C29E4.1.1:c.562C>T | |||||
| HGVSg | CHROMOSOME_III:g.7949451C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C29E4 | |
| Flanking_sequences | agtaactctcaaggatgcccagctggaccaccaggaccaccaggacttccaggaaagcgtggagatgaaggagttgttggagatcttggacgttctggagcatctggaatctcacttgcagctgttcatcacattccaggaggatgcatcaactgcccagccggaccagctggaccaccaggacaacaaggaccagttggaccacaaggattcccaggagttgttggaacatgtggaccatcgggagatgatggacaaccaggaccagctggaccacttggagataagggagcccaagga | caaaaggattcgatggagccgatggaccagatggcatgccaggaactgcatacttcccaggagctgttggacaaccaggagagccaggatggttgggacaaccaggacttccaggaaaacacggagaaccaggacaagatggagaagaaggaccaaagggagcaccaggaacaccaggatcaaatggaagagatgcttatccaggacaaccaggaaaggctggagagccaggagctgttggttagttattttttataatctgaagaaaattaattatttcaaaagctcaattctatttct | |||
| Mapping_target | C29E4 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (26) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01266016 | |||
| WBVar01331330 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000665 | |||
| Transcript | C29E4.1.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | C29E4.1.1:c.562C>T | ||||
| HGVSp | CE00083:p.Pro188Ser | ||||
| cDNA_position | 614 | ||||
| CDS_position | 562 | ||||
| Protein_position | 188 | ||||
| Exon_number | 2/4 | ||||
| Codon_change | Cca/Tca | ||||
| Amino_acid_change | P/S | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
