WormBase Tree Display for Variation: WBVar00061034
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| WBVar00061034 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00061034 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_III:g.7636046G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | ZK783 | |
| Flanking_sequences | ttcttctaaatcacctgtatcgtcttcaacagaagggataagtgtcgtgacgtcaaccgagttctcaaaagtccccgagtccacaatctcttctgttttggaagaggatctcactaaaaccactccttcaccaatcttagaagaaacaacgacggcatcagaaacttctgaacctttaactgaagactcactaactgtgtctgtaagaatccacgagcttacaacatcttcagaaaacgtccccaaagaatccgaatccacaacaacctcttcagaaagttctaagccttctcaagagcc | gctggcatactcacatcaactgtcgttgtcccaacatcttctgtgtcgttgataacagcttctgaaattgaagctatcacttcaaacactccttttaaacaaggtagaacaccaataaccacttctccaaaatcacttgtcaagtctaccacgtctccaagtactgtcacgtcttctgaaccatcagaatccaccagtgaatcgtcgtcaagtcctgaaccatccacgttaccaaaagagaaaggaaacttatcagataaatcttcagaacgtactactgtttctacaactgtctctacc | |||
| Mapping_target | ZK783 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (26) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01265670 | |||
| WBVar01330991 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00022816 | |||
| Transcript | ZK783.1f.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1f.1:c.5855-1145G>A | ||||
| Intron_number | 14/22 | ||||
| ZK783.1j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1j.1:c.6541-269G>A | ||||
| Intron_number | 14/14 | ||||
| ZK783.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1g.1:c.5855-1145G>A | ||||
| Intron_number | 14/22 | ||||
| ZK783.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1h.1:c.5855-1310G>A | ||||
| Intron_number | 14/21 | ||||
| ZK783.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1d.1:c.5855-269G>A | ||||
| Intron_number | 14/22 | ||||
| ZK783.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1e.1:c.5855-269G>A | ||||
| Intron_number | 14/22 | ||||
| ZK783.1k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1k.1:c.5930-269G>A | ||||
| Intron_number | 15/24 | ||||
| ZK783.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1a.1:c.5924-269G>A | ||||
| Intron_number | 15/25 | ||||
| ZK783.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1b.1:c.5855-269G>A | ||||
| Intron_number | 14/24 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
