WormBase Tree Display for Variation: WBVar00060815
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| WBVar00060815 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00060815 | |||
| Other_name | pas23760 | ||||
| cewivar00107055 | |||||
| R01H2.2.1:c.682-143A>G | |||||
| HGVSg | CHROMOSOME_III:g.7057749A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | R01H2 | |
| Flanking_sequences | tgaatttatttcattcagcatctactatatacaaagaaggtgataaagtgcacatgtatgggattgaatacgagaacaatgcacggtcagaaagtgaatggaaacacaggaatgatccggtgagaatataatttgtttacttggtcgcacgttttctgcaacaattatgtacctggcaaaggggataaatgaaaaagaaacttatgttcccagagagcttcatgatattttgatccaaggctcatattgatttcatatattcaggatgtattcaactgaaatccagatatacaatgcatt | tcatgacctactaatactttgtatcaaaatatcttgaatttcaataggaagaattgttccatttgtggtatttcagaattcagaagttccgagaattttaatttaaaccctactggccgtatttcctgtaatacatttccagatagaagatttctactccgaatggatcagaacactgaaacaaggatcggataggccccttgcaaaaggtgatcgtggcgggccacttgtaacagatgatggagttctaattggatttggatcaacatgtaattccagttataagattacataaaaata | |||
| Mapping_target | R01H2 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (72) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01446435 | |||
| WBVar01446436 | |||||
| WBVar01265013 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019810 | |||
| Transcript | R01H2.2.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R01H2.2.1:c.682-143A>G | ||||
| Intron_number | 6/8 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
