WormBase Tree Display for Variation: WBVar00057580

WBVar00057580 Name: Public_name: WBVar00057580
    Other_name: pas23113
      haw43770
      cewivar00106963
      F31E3.2b.1:c.1016+21T>A
      F31E3.2a.1:c.1016+21T>A
      F31E3.2c.1:c.*911+21T>A
    HGVSg: CHROMOSOME_III:g.6977215T>A
  Sequence_details: SMap: S_parent: Sequence: F31E3
    Flanking_sequences: agaatgacgtgatctatcgagatgtaaaactggaaaatgtagttctagatcaatggggtcacgccttgctaattgattttggtttggcaaaaaagctgaaacaaggttctagtaccggaacaatatgtggaacattacaatacatgtcacctgacgtggcatctggtggaacatattctcattatgttgattggtggtcattaggtgtactcttgcatattttattaactggaatatatccatatccaaattcagaagccacacatcatgctaatttaaagtaagttcacatcacagatt tagaataatctcttatgcttttcagattcattgactacagtactcctataggatgttcacgtgaattcgccaaccttatggatagagtgagttcagaaactcggaaaaaaacgttaatatcattagtttcagatgttagcagtttccataacccatcgtttatgctcattcactgttcttcacgcccatccatttttccgatccattgacttttcgaaattggaacaaaaagattacacacctgcagcggaaattggtaacgctgaatatgatacttatcacaaaagtgaggacgcgttg
    Mapping_target: F31E3
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (59)
    Laboratory: RW
    Person: WBPerson6900
      WBPerson1562
    Analysis: WGS_Pasadena_Quinlan
      Million_mutation_project_reanalysis
      WGS_Hawaiian_Waterston
      WGS_Andersen
    History: Acquires_merge: WBVar01446392
        WBVar00063242
    Status: Live
  Affects: Gene: WBGene00017950
    Transcript: F31E3.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F31E3.2b.1:c.1016+21T>A
        Intron_number: 8/11
      F31E3.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F31E3.2a.1:c.1016+21T>A
        Intron_number: 8/10
      F31E3.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F31E3.2c.1:c.*911+21T>A
        Intron_number: 8/10
  Method: WGS_Pasadena_Quinlan