WormBase Tree Display for Variation: WBVar00057405
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| WBVar00057405 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00057405 | |||
| Other_name | pas23078 | ||||
| haw43679 | |||||
| haw143738 | |||||
| cewivar00106897 | |||||
| R13F6.10.1:c.1408+22T>G | |||||
| HGVSg | CHROMOSOME_III:g.6867420A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | R13F6 | |
| Flanking_sequences | aggttgaatcttccagaagtttcataaactgggaatgtcaaatgaccaagtgtatccatttgaattacttttatgtcgagcgtcttcacgagagctgaaatccttccggtggcgcctgaaaagtgagcgataaaacttcagtttaatatattttctaactgacaaagggcagaatatgctctaatcaatgcaagcttgcacattgggtcggttttattggaggcggccacgaattcaaggagcaagatcatttcgtagaactttgtaagatcatctgttaattttgtgtatttaatgcaa | tattatttcaaatccacttactttctttgcgataagcgtcccaaagatgagaaaccgtcaaattgcagagaacaccttgagcgtgttctgttctttcaggctgaaaattcagcgatttttcttcaaataactttttttcactgaaaaacgtaccgcggcgatttgtgcaatgcattgctggaatagagatctatgacctgcagcatccattttttcatattctccaagagctcgacgacagcgttctgttagaatgatagcccacacttttgactcctacagaaaattttatttgacaaa | |||
| Mapping_target | R13F6 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (55) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01446342 | |||
| WBVar01446343 | |||||
| WBVar00062787 | |||||
| WBVar00563603 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020068 | |||
| Transcript | R13F6.10.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R13F6.10.1:c.1408+22T>G | ||||
| Intron_number | 12/21 | ||||
| Reference | WBPaper00038208 | ||||
| Method | WGS_Pasadena_Quinlan |
