WormBase Tree Display for Variation: WBVar00056975
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| WBVar00056975 | Name | Public_name | WBVar00056975 | ||
|---|---|---|---|---|---|
| Other_name | pas22992 | ||||
| haw7989 | |||||
| haw117900 | |||||
| cewivar00000997 | |||||
| T22C1.6.1:c.*100A>T | |||||
| HGVSg | CHROMOSOME_I:g.7945399A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T22C1 | |
| Flanking_sequences | cgtatttagaagtgatgtataacatttctcgagtcatttattttcagaaaagtgcttgtgttgactatgacaaatcaagaatatgccgagaagatcgccacatcggacaagaaaattcaaatgcttgagaacctgtgtcgcgctctccgaaaaggcgaacaggagccggtgaccactgccgaaacaaccgaggcaaactgagaatatattactgttccctcattaatacgccgaattcttctggtcccggatctcgtgtatatatatatcaaactaacagtgacaaataataatactagt | tacctgttttcataattttgttgttttctaaaatctcacagcttttctccaaatgttttgactgaccatttttcgtctccttccattacatcccaatccccaaccacaaggaaacgtaatttatttcatcttttttataaatattctcgttgaagaactggtttattggtttttgtttaaaatgagcctgtgacgaatgagatgaaaaccagatgggcggcacatttagagaaggtggatctttgatcttttgatctttatttgaagatgaaatgaatagatcactggtttcactttttt | |||
| Mapping_target | T22C1 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (175) | |||||
| Laboratory | QX | ||||
| AX | |||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01345797 | |||
| WBVar00154739 | |||||
| WBVar01421986 | |||||
| WBVar01432213 | |||||
| WBVar01283586 | |||||
| WBVar00537765 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00011917 | |||
| Transcript | T22C1.6.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T22C1.6.1:c.*100A>T | ||||
| cDNA_position | 1330 | ||||
| Exon_number | 8/8 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
