WormBase Tree Display for Variation: WBVar00056256
expand all nodes | collapse all nodes | view schema
| WBVar00056256 | Name | Public_name | WBVar00056256 | ||
|---|---|---|---|---|---|
| Other_name | pas22848 | ||||
| cewivar00106566 | |||||
| CE30119:p.Lys272= | |||||
| ZC395.6.1:c.816A>G | |||||
| HGVSg | CHROMOSOME_III:g.5266297A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | ZC395 | |
| Flanking_sequences | ttttagaagaaagacttgatggaagagttgataaaatgattaaattgggtttgaagaatgaattgatcgagttttataacgaggtaaatatttgaatttttccagaaaaaaaaagaaaattttttattattttgtttttttttcattctttactattttccaaaaaagtttaaacttttgaaaactgttcagaaaatgttcgtgtatttattttagcttactgaggcattatttcattgtgatttttactatactctataaactaaattttcagcacgccgagtacataaatcacagcaa | tatggtgtcatgcaatgtattggtcttaaagaattcgttccatggctcaatttggacccatcagaaagagatacactcaatggggataaattgttcaagcaagggtaatttaaatttattttcaatttttataaattccaagctattttcagatgcgatgatgtgaagcttcacactcgacaatatgcacggcgccagagacggtggtatcgatcgagacttttaaaacggtcggatggtgatcgggtatgttgattttaaaaaaattgaatttttaaagaacttttttactaaattaac | |||
| Mapping_target | ZC395 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (36) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01445669 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00001740 | |||
| Transcript | ZC395.6.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | ZC395.6.1:c.816A>G | ||||
| HGVSp | CE30119:p.Lys272= | ||||
| cDNA_position | 839 | ||||
| CDS_position | 816 | ||||
| Protein_position | 272 | ||||
| Exon_number | 6/11 | ||||
| Codon_change | aaA/aaG | ||||
| Amino_acid_change | K | ||||
| Method | WGS_Pasadena_Quinlan |
