WormBase Tree Display for Variation: WBVar00055571
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WBVar00055571 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00055571 | |||
Other_name | pas22711 | ||||
haw105922 | |||||
cewivar00059910 | |||||
C28G1.2.1:c.-260G>A | |||||
HGVSg | CHROMOSOME_X:g.8836384G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C28G1 | |
Flanking_sequences | ctactcaaactagagatgtatgttcatagtcccatgtggtctagtggttaggattcgtggttttcacccacgcggcccgggttcgattcccggcatgggaagtttctttttgcatagtttttactcaaataattttatatttgtttgtcgaagctgataaatatttatccgacattgccttattgaatgttgtttttcttgctctaggcggaaattacaattccgaaaagagagcacatatttataaaaaattgtaaacagctaagtttcttgcagccacttctaactgtgaaaatgtcc | tcgaattcaatatttaatactcaacagagtttattttgcactaaatgattttttgatttccaaagttttattttatcttcatgtttcctgtctatgatctctgactcatgactaatagagatcacatttttctgtttctcttgatctcaacaattcaccgagatgataaattgctcaaaatgttgtaacatttgttgttttcaattaagttcaaaaaaatagagggataaatgtttagttgtgttctgaactggtacacatgagtgctcaaagtctttctggtattgaaaccacttttgg | |||
Mapping_target | C28G1 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (121) | |||||
Laboratory | QX | ||||
RW | |||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Hawaiian_Waterston | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01470275 | |||
WBVar00081562 | |||||
Status | Live | ||||
Affects | Gene | WBGene00016187 | |||
Transcript | C28G1.2.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C28G1.2.1:c.-260G>A | ||||
cDNA_position | 369 | ||||
Exon_number | 1/7 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |